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Multi-CSAR: a multiple reference-based contig scaffolder using algebraic rearrangements

BACKGROUND: One of the important steps in the process of assembling a genome sequence from short reads is scaffolding, in which the contigs in a draft genome are ordered and oriented into scaffolds. Currently, several scaffolding tools based on a single reference genome have been developed. However,...

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Pubblicato in:BMC Syst Biol
Autori principali: Chen, Kun-Tze, Shen, Hsin-Ting, Lu, Chin Lung
Natura: Artigo
Lingua:Inglês
Pubblicazione: BioMed Central 2018
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Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC6311912/
https://ncbi.nlm.nih.gov/pubmed/30598087
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12918-018-0654-y
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