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De novo finished 2.8 Mbp Staphylococcus aureus genome assembly from 100 bp short and long range paired-end reads

Motivation: Paired-end sequencing allows circumventing the shortness of the reads produced by second generation sequencers and is essential for de novo assembly of genomes. However, obtaining a finished genome from short reads is still an open challenge. We present an algorithm that exploits the pai...

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Vydáno v:Bioinformatics
Hlavní autoři: Hernandez, David, Tewhey, Ryan, Veyrieras, Jean-Baptiste, Farinelli, Laurent, Østerås, Magne, François, Patrice, Schrenzel, Jacques
Médium: Artigo
Jazyk:Inglês
Vydáno: Oxford University Press 2014
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC6280916/
https://ncbi.nlm.nih.gov/pubmed/24130309
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btt590
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