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Biospark: scalable analysis of large numerical datasets from biological simulations and experiments using Hadoop and Spark

SUMMARY: Data-parallel programming techniques can dramatically decrease the time needed to analyze large datasets. While these methods have provided significant improvements for sequencing-based analyses, other areas of biological informatics have not yet adopted them. Here, we introduce Biospark, a...

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Veröffentlicht in:Bioinformatics
Hauptverfasser: Klein, Max, Sharma, Rati, Bohrer, Chris H, Avelis, Cameron M, Roberts, Elijah
Format: Artigo
Sprache:Inglês
Veröffentlicht: Oxford University Press 2017
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6276899/
https://ncbi.nlm.nih.gov/pubmed/27663493
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw614
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