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Synthetic protein alignments by CCMgen quantify noise in residue-residue contact prediction

Compensatory mutations between protein residues in physical contact can manifest themselves as statistical couplings between the corresponding columns in a multiple sequence alignment (MSA) of the protein family. Conversely, large coupling coefficients predict residue contacts. Methods for de-novo p...

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Veröffentlicht in:PLoS Comput Biol
Hauptverfasser: Vorberg, Susann, Seemayer, Stefan, Söding, Johannes
Format: Artigo
Sprache:Inglês
Veröffentlicht: Public Library of Science 2018
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Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6237422/
https://ncbi.nlm.nih.gov/pubmed/30395601
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1006526
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