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Draft genome sequence of first monocot-halophytic species Oryza coarctata reveals stress-specific genes

Oryza coarctata (KKLL; 2n = 4x = 48, 665 Mb) also known as Porteresia coarctata is an extreme halophyte species of genus Oryza. Using Illumina and Nanopore reads, we achieved the assembled genome size of 569.9 Mb, accounting 85.69% of the estimated genome size with N50 of 1.85 Mb and 19.89% repetiti...

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Bibliographische Detailangaben
Veröffentlicht in:Sci Rep
Hauptverfasser: Mondal, Tapan Kumar, Rawal, Hukam Chand, Chowrasia, Soni, Varshney, Deepti, Panda, Alok Kumar, Mazumdar, Abhishek, Kaur, Harmeet, Gaikwad, Kishor, Sharma, Tilak Raj, Singh, Nagendra Kumar
Format: Artigo
Sprache:Inglês
Veröffentlicht: Nature Publishing Group UK 2018
Schlagworte:
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6135824/
https://ncbi.nlm.nih.gov/pubmed/30209320
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/s41598-018-31518-y
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