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TraRECo: a greedy approach based de novo transcriptome assembler with read error correction using consensus matrix
BACKGROUND: The challenges when developing a good de novo transcriptome assembler include how to deal with read errors and sequence repeats. Almost all de novo assemblers utilize a de Bruijn graph, with which complexity grows linearly with data size while suffering from errors and repeats. Although...
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| Publié dans: | BMC Genomics |
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| Auteurs principaux: | , , , |
| Format: | Artigo |
| Langue: | Inglês |
| Publié: |
BioMed Central
2018
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| Sujets: | |
| Accès en ligne: | https://ncbi.nlm.nih.gov/pmc/articles/PMC6123912/ https://ncbi.nlm.nih.gov/pubmed/30180798 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12864-018-5034-x |
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