Comparison of two bioinformatics tools used to characterize the microbial diversity and predictive functional attributes of microbial mats from Lake Obersee, Antarctica

In this study, using NextGen sequencing of the collective 16S rRNA genes obtained from two sets of samples collected from Lake Obersee, Antarctica, we compared and contrasted two bioinformatics tools, PICRUSt and Tax4Fun. We then developed an R script to assess the taxonomic and predictive functiona...

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Publicado en:J Microbiol Methods
Autores principales: Koo, Hyunmin, Hakim, Joseph A., Morrow, Casey D., Eipers, Peter G., Davila, Alfonso, Andersen, Dale T., Bej, Asim K.
Formato: Artigo
Lenguaje:Inglês
Publicado: 2017
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Article
Acceso en línea:https://ncbi.nlm.nih.gov/pmc/articles/PMC6108183/
https://ncbi.nlm.nih.gov/pubmed/28655556
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.mimet.2017.06.017
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