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BBK* (Branch and Bound Over K*): A Provable and Efficient Ensemble-Based Protein Design Algorithm to Optimize Stability and Binding Affinity Over Large Sequence Spaces

Computational protein design (CPD) algorithms that compute binding affinity, K(a), search for sequences with an energetically favorable free energy of binding. Recent work shows that three principles improve the biological accuracy of CPD: ensemble-based design, continuous flexibility of backbone an...

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Detalhes bibliográficos
Publicado no:J Comput Biol
Main Authors: Ojewole, Adegoke A., Jou, Jonathan D., Fowler, Vance G., Donald, Bruce R.
Formato: Artigo
Idioma:Inglês
Publicado em: Mary Ann Liebert, Inc. 2018
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC6074059/
https://ncbi.nlm.nih.gov/pubmed/29641249
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1089/cmb.2017.0267
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