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Applying Pose Clustering and MD Simulations To Eliminate False Positives in Molecular Docking

In this work, we developed a computational protocol that employs multiple molecular docking experiments, followed by pose clustering, molecular dynamic simulations (10 ns), and energy rescoring to produce reliable 3D models of antibody–carbohydrate complexes. The protocol was applied to 10 antibody–...

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Detaylı Bibliyografya
Yayımlandı:J Chem Inf Model
Asıl Yazarlar: Makeneni, Spandana, Thieker, David F., Woods, Robert J.
Materyal Türü: Artigo
Dil:Inglês
Baskı/Yayın Bilgisi: 2018
Konular:
Online Erişim:https://ncbi.nlm.nih.gov/pmc/articles/PMC6067002/
https://ncbi.nlm.nih.gov/pubmed/29431438
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1021/acs.jcim.7b00588
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