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De novo assembly of bacterial genomes with repetitive DNA regions by dnaasm application

BACKGROUND: Many organisms, in particular bacteria, contain repetitive DNA fragments called tandem repeats. These structures are restored by DNA assemblers by mapping paired-end tags to unitigs, estimating the distance between them and filling the gap with the specified DNA motif, which could be rep...

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Detalles Bibliográficos
Publicado en:BMC Bioinformatics
Main Authors: Kuśmirek, Wiktor, Nowak, Robert
Formato: Artigo
Idioma:Inglês
Publicado: BioMed Central 2018
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Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC6052550/
https://ncbi.nlm.nih.gov/pubmed/30021513
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-018-2281-4
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