ARKS: chromosome-scale scaffolding of human genome drafts with linked read kmers

BACKGROUND: The long-range sequencing information captured by linked reads, such as those available from 10× Genomics (10xG), helps resolve genome sequence repeats, and yields accurate and contiguous draft genome assemblies. We introduce ARKS, an alignment-free linked read genome scaffolding methodo...

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Bibliografiske detaljer
Udgivet i:BMC Bioinformatics
Main Authors: Coombe, Lauren, Zhang, Jessica, Vandervalk, Benjamin P., Chu, Justin, Jackman, Shaun D., Birol, Inanc, Warren, René L.
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2018
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Software
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC6011487/
https://ncbi.nlm.nih.gov/pubmed/29925315
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-018-2243-x
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