Topological Data Analysis as a Morphometric Method: Using Persistent Homology to Demarcate a Leaf Morphospace

Current morphometric methods that comprehensively measure shape cannot compare the disparate leaf shapes found in seed plants and are sensitive to processing artifacts. We explore the use of persistent homology, a topological method applied as a filtration across simplicial complexes (or more simply...

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發表在:Front Plant Sci
Main Authors: Li, Mao, An, Hong, Angelovici, Ruthie, Bagaza, Clement, Batushansky, Albert, Clark, Lynn, Coneva, Viktoriya, Donoghue, Michael J., Edwards, Erika, Fajardo, Diego, Fang, Hui, Frank, Margaret H., Gallaher, Timothy, Gebken, Sarah, Hill, Theresa, Jansky, Shelley, Kaur, Baljinder, Klahs, Phillip C., Klein, Laura L., Kuraparthy, Vasu, Londo, Jason, Migicovsky, Zoë, Miller, Allison, Mohn, Rebekah, Myles, Sean, Otoni, Wagner C., Pires, J. C., Rieffer, Edmond, Schmerler, Sam, Spriggs, Elizabeth, Topp, Christopher N., Van Deynze, Allen, Zhang, Kuang, Zhu, Linglong, Zink, Braden M., Chitwood, Daniel H.
格式: Artigo
語言:Inglês
出版: Frontiers Media S.A. 2018
主題:
Plant Science
在線閱讀:https://ncbi.nlm.nih.gov/pmc/articles/PMC5996898/
https://ncbi.nlm.nih.gov/pubmed/29922307
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.3389/fpls.2018.00553
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