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Pycellerator: an arrow-based reaction-like modelling language for biological simulations

Motivation: We introduce Pycellerator, a Python library for reading Cellerator arrow notation from standard text files, conversion to differential equations, generating stand-alone Python solvers, and optionally running and plotting the solutions. All of the original Cellerator arrows, which represe...

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Detalhes bibliográficos
Publicado no:Bioinformatics
Main Authors: Shapiro, Bruce E., Mjolsness, Eric
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5963356/
https://ncbi.nlm.nih.gov/pubmed/26504142
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btv596
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