Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

BACKGROUND: Taxonomic classification of marker-gene sequences is an important step in microbiome analysis. RESULTS: We present q2-feature-classifier (https://github.com/qiime2/q2-feature-classifier), a QIIME 2 plugin containing several novel machine-learning and alignment-based methods for taxonomy...

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Salvato in:
Dettagli Bibliografici
Pubblicato in:Microbiome
Autori principali: Bokulich, Nicholas A., Kaehler, Benjamin D., Rideout, Jai Ram, Dillon, Matthew, Bolyen, Evan, Knight, Rob, Huttley, Gavin A., Gregory Caporaso, J.
Natura: Artigo
Lingua:Inglês
Pubblicazione: BioMed Central 2018
Soggetti:
Research
Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC5956843/
https://ncbi.nlm.nih.gov/pubmed/29773078
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s40168-018-0470-z
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