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Pseudoalignment for metagenomic read assignment

MOTIVATION: Read assignment is an important first step in many metagenomic analysis workflows, providing the basis for identification and quantification of species. However ambiguity among the sequences of many strains makes it difficult to assign reads at the lowest level of taxonomy, and reads are...

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Bibliografische gegevens
Gepubliceerd in:Bioinformatics
Hoofdauteurs: Schaeffer, L, Pimentel, H, Bray, N, Melsted, P, Pachter, L
Formaat: Artigo
Taal:Inglês
Gepubliceerd in: Oxford University Press 2017
Onderwerpen:
Online toegang:https://ncbi.nlm.nih.gov/pmc/articles/PMC5870846/
https://ncbi.nlm.nih.gov/pubmed/28334086
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btx106
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