DeepBound: accurate identification of transcript boundaries via deep convolutional neural fields

MOTIVATION: Reconstructing the full-length expressed transcripts (a.k.a. the transcript assembly problem) from the short sequencing reads produced by RNA-seq protocol plays a central role in identifying novel genes and transcripts as well as in studying gene expressions and gene functions. A crucial...

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Detalhes bibliográficos
Publicado no:Bioinformatics
Main Authors: Shao, Mingfu, Ma, Jianzhu, Wang, Sheng
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2017
Assuntos:
Ismb/Eccb 2017: The 25th Annual Conference Intelligent Systems for Molecular Biology Held Jointly with the 16th Annual European Conference on Computational Biology, Prague, Czech Republic, July 21–25, 2017
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5870651/
https://ncbi.nlm.nih.gov/pubmed/28881999
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btx267
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