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A novel data structure to support ultra-fast taxonomic classification of metagenomic sequences with k-mer signatures

MOTIVATION: Metagenomic read classification is a critical step in the identification and quantification of microbial species sampled by high-throughput sequencing. Although many algorithms have been developed to date, they suffer significant memory and/or computational costs. Due to the growing popu...

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Bibliografski detalji
Izdano u:Bioinformatics
Glavni autori: Liu, Xinan, Yu, Ye, Liu, Jinpeng, Elliott, Corrine F, Qian, Chen, Liu, Jinze
Format: Artigo
Jezik:Inglês
Izdano: Oxford University Press 2018
Teme:
Online pristup:https://ncbi.nlm.nih.gov/pmc/articles/PMC5870563/
https://ncbi.nlm.nih.gov/pubmed/29036588
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btx432
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