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FSH: fast spaced seed hashing exploiting adjacent hashes
BACKGROUND: Patterns with wildcards in specified positions, namely spaced seeds, are increasingly used instead of k-mers in many bioinformatics applications that require indexing, querying and rapid similarity search, as they can provide better sensitivity. Many of these applications require to comp...
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| Publicado no: | Algorithms Mol Biol |
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| Main Authors: | , , |
| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
BioMed Central
2018
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| Assuntos: | |
| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC5863468/ https://ncbi.nlm.nih.gov/pubmed/29588651 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13015-018-0125-4 |
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