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Compression of genomic sequencing reads via hash-based reordering: algorithm and analysis

MOTIVATION: New Generation Sequencing (NGS) technologies for genome sequencing produce large amounts of short genomic reads per experiment, which are highly redundant and compressible. However, general-purpose compressors are unable to exploit this redundancy due to the special structure present in...

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Detalhes bibliográficos
Publicado no:Bioinformatics
Main Authors: Chandak, Shubham, Tatwawadi, Kedar, Weissman, Tsachy
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2018
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5860611/
https://ncbi.nlm.nih.gov/pubmed/29444237
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btx639
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