SNP interaction pattern identifier (SIPI): an intensive search for SNP–SNP interaction patterns

Motivation: Testing SNP–SNP interactions is considered as a key for overcoming bottlenecks of genetic association studies. However, related statistical methods for testing SNP–SNP interactions are underdeveloped. Results: We propose the SNP Interaction Pattern Identifier (SIPI), which tests 45 biolo...

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Published in:Bioinformatics
Main Authors: Lin, Hui-Yi, Chen, Dung-Tsa, Huang, Po-Yu, Liu, Yung-Hsin, Ochoa, Augusto, Zabaleta, Jovanny, Mercante, Donald E., Fang, Zhide, Sellers, Thomas A., Pow-Sang, Julio M., Cheng, Chia-Ho, Eeles, Rosalind, Easton, Doug, Kote-Jarai, Zsofia, Amin Al Olama, Ali, Benlloch, Sara, Muir, Kenneth, Giles, Graham G., Wiklund, Fredrik, Gronberg, Henrik, Haiman, Christopher A., Schleutker, Johanna, Nordestgaard, Børge G., Travis, Ruth C., Hamdy, Freddie, Pashayan, Nora, Khaw, Kay-Tee, Stanford, Janet L., Blot, William J., Thibodeau, Stephen N., Maier, Christiane, Kibel, Adam S., Cybulski, Cezary, Cannon-Albright, Lisa, Brenner, Hermann, Kaneva, Radka, Batra, Jyotsna, Teixeira, Manuel R., Pandha, Hardev, Lu, Yong-Jie, Park, Jong Y.
Format: Artigo
Language:Inglês
Published: Oxford University Press 2017
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Original Papers
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC5860469/
https://ncbi.nlm.nih.gov/pubmed/28039167
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw762
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