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SPATKIN: a simulator for rule-based modeling of biomolecular site dynamics on surfaces

SUMMARY: Rule-based modeling is a powerful approach for studying biomolecular site dynamics. Here, we present SPATKIN, a general-purpose simulator for rule-based modeling in two spatial dimensions. The simulation algorithm is a lattice-based method that tracks Brownian motion of individual molecules...

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Detalhes bibliográficos
Publicado no:Bioinformatics
Main Authors: Kochańczyk, Marek, Hlavacek, William S, Lipniacki, Tomasz
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2017
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5860254/
https://ncbi.nlm.nih.gov/pubmed/29036531
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btx456
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