Phenetic Comparison of Prokaryotic Genomes Using k-mers

Bacterial genomics studies are getting more extensive and complex, requiring new ways to envision analyses. Using the Ray Surveyor software, we demonstrate that comparison of genomes based on their k-mer content allows reconstruction of phenetic trees without the need of prior data curation, such as...

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Bibliographic Details
Published in:Mol Biol Evol
Main Authors: Déraspe, Maxime, Raymond, Frédéric, Boisvert, Sébastien, Culley, Alexander, Roy, Paul H., Laviolette, François, Corbeil, Jacques
Format: Artigo
Language:Inglês
Published: Oxford University Press 2017
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Methods
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC5850840/
https://ncbi.nlm.nih.gov/pubmed/28957508
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/molbev/msx200
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