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Extension of the viral ecology in humans using viral profile hidden Markov models
When human samples are sequenced, many assembled contigs are “unknown”, as conventional alignments find no similarity to known sequences. Hidden Markov models (HMM) exploit the positions of specific nucleotides in protein-encoding codons in various microbes. The algorithm HMMER3 implements HMM using...
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| Publié dans: | PLoS One |
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| Auteurs principaux: | , , |
| Format: | Artigo |
| Langue: | Inglês |
| Publié: |
Public Library of Science
2018
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| Sujets: | |
| Accès en ligne: | https://ncbi.nlm.nih.gov/pmc/articles/PMC5774701/ https://ncbi.nlm.nih.gov/pubmed/29351302 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0190938 |
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