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Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants

Whole-genome sequencing data allow detection of copy number variation (CNV) at high resolution. However, estimation based on read coverage along the genome suffers from bias due to GC content and other factors. Here, we develop an algorithm called BIC-seq2 that combines normalization of the data at...

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Bibliografiske detaljer
Udgivet i:Nucleic Acids Res
Main Authors: Xi, Ruibin, Lee, Semin, Xia, Yuchao, Kim, Tae-Min, Park, Peter J
Format: Artigo
Sprog:Inglês
Udgivet: Oxford University Press 2016
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC5772337/
https://ncbi.nlm.nih.gov/pubmed/27260798
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkw491
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