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Phylogeny reconstruction based on the length distribution of k-mismatch common substrings

BACKGROUND: Various approaches to alignment-free sequence comparison are based on the length of exact or inexact word matches between pairs of input sequences. Haubold et al. (J Comput Biol 16:1487–1500, 2009) showed how the average number of substitutions per position between two DNA sequences can...

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Publicat a:Algorithms Mol Biol
Autors principals: Morgenstern, Burkhard, Schöbel, Svenja, Leimeister, Chris-André
Format: Artigo
Idioma:Inglês
Publicat: BioMed Central 2017
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Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC5724348/
https://ncbi.nlm.nih.gov/pubmed/29238399
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13015-017-0118-8
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