SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology

The recent widespread application of whole-genome sequencing (WGS) for microbial disease investigations has spurred the development of new bioinformatics tools, including a notable proliferation of phylogenomics pipelines designed for infectious disease surveillance and outbreak investigation. Trans...

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Bibliographic Details
Published in:Microb Genom
Main Authors: Petkau, Aaron, Mabon, Philip, Sieffert, Cameron, Knox, Natalie C., Cabral, Jennifer, Iskander, Mariam, Iskander, Mark, Weedmark, Kelly, Zaheer, Rahat, Katz, Lee S., Nadon, Celine, Reimer, Aleisha, Taboada, Eduardo, Beiko, Robert G., Hsiao, William, Brinkman, Fiona, Graham, Morag, Van Domselaar, Gary
Format: Artigo
Language:Inglês
Published: Microbiology Society 2017
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Methods Paper
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC5628696/
https://ncbi.nlm.nih.gov/pubmed/29026651
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1099/mgen.0.000116
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