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recount workflow: Accessing over 70,000 human RNA-seq samples with Bioconductor

The recount2 resource is composed of over 70,000 uniformly processed human RNA-seq samples spanning TCGA and SRA, including GTEx. The processed data can be accessed via the recount2 website and the recountBioconductor package. This workflow explains in detail how to use the recountpackage and how to...

Disgrifiad llawn

Wedi'i Gadw mewn:
Manylion Llyfryddiaeth
Cyhoeddwyd yn:F1000Res
Prif Awduron: Collado-Torres, Leonardo, Nellore, Abhinav, Jaffe, Andrew E.
Fformat: Artigo
Iaith:Inglês
Cyhoeddwyd: F1000Research 2017
Pynciau:
Mynediad Ar-lein:https://ncbi.nlm.nih.gov/pmc/articles/PMC5621122/
https://ncbi.nlm.nih.gov/pubmed/29043067
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.12688/f1000research.12223.1
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