Rapid de novo assembly of the European eel genome from nanopore sequencing reads

We have sequenced the genome of the endangered European eel using the MinION by Oxford Nanopore, and assembled these data using a novel algorithm specifically designed for large eukaryotic genomes. For this 860 Mbp genome, the entire computational process takes two days on a single CPU. The resultin...

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Publicado no:Sci Rep
Main Authors: Jansen, Hans J., Liem, Michael, Jong-Raadsen, Susanne A., Dufour, Sylvie, Weltzien, Finn-Arne, Swinkels, William, Koelewijn, Alex, Palstra, Arjan P., Pelster, Bernd, Spaink, Herman P., Thillart, Guido E. van den, Dirks, Ron P., Henkel, Christiaan V.
Formato: Artigo
Idioma:Inglês
Publicado em: Nature Publishing Group UK 2017
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Article
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5543108/
https://ncbi.nlm.nih.gov/pubmed/28775309
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1038/s41598-017-07650-6
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