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A clustering method for repeat analysis in DNA sequences

BACKGROUND: A computational system for analysis of the repetitive structure of genomic sequences is described. The method uses suffix trees to organize and search the input sequences; this data structure has been used previously for efficient computation of exact and degenerate repeats. RESULTS: The...

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Hlavní autoři: Volfovsky, Natalia, Haas, Brian J, Salzberg, Steven L
Médium: Artigo
Jazyk:Inglês
Vydáno: BioMed Central 2001
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC55324/
https://ncbi.nlm.nih.gov/pubmed/11532211
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