A viral metagenomic approach on a non-metagenomic experiment: Mining next generation sequencing datasets from pig DNA identified several porcine parvoviruses for a retrospective evaluation of viral infections

Shot-gun next generation sequencing (NGS) on whole DNA extracted from specimens collected from mammals often produces reads that are not mapped (i.e. unmapped reads) on the host reference genome and that are usually discarded as by-products of the experiments. In this study, we mined Ion Torrent rea...

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Veröffentlicht in:PLoS One
Hauptverfasser: Bovo, Samuele, Mazzoni, Gianluca, Ribani, Anisa, Utzeri, Valerio Joe, Bertolini, Francesca, Schiavo, Giuseppina, Fontanesi, Luca
Format: Artigo
Sprache:Inglês
Veröffentlicht: Public Library of Science 2017
Schlagworte:
Research Article
Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC5491021/
https://ncbi.nlm.nih.gov/pubmed/28662150
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0179462
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