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DeepNano: Deep recurrent neural networks for base calling in MinION nanopore reads
The MinION device by Oxford Nanopore produces very long reads (reads over 100 kBp were reported); however it suffers from high sequencing error rate. We present an open-source DNA base caller based on deep recurrent neural networks and show that the accuracy of base calling is much dependent on the...
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| Veröffentlicht in: | PLoS One |
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| Hauptverfasser: | , , |
| Format: | Artigo |
| Sprache: | Inglês |
| Veröffentlicht: |
Public Library of Science
2017
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| Schlagworte: | |
| Online Zugang: | https://ncbi.nlm.nih.gov/pmc/articles/PMC5459436/ https://ncbi.nlm.nih.gov/pubmed/28582401 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pone.0178751 |
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