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StreAM-[Formula: see text] : algorithms for analyzing coarse grained RNA dynamics based on Markov models of connectivity-graphs

BACKGROUND: In this work, we present a new coarse grained representation of RNA dynamics. It is based on adjacency matrices and their interactions patterns obtained from molecular dynamics simulations. RNA molecules are well-suited for this representation due to their composition which is mainly mod...

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Detalhes bibliográficos
Publicado no:Algorithms Mol Biol
Main Authors: Jager, Sven, Schiller, Benjamin, Babel, Philipp, Blumenroth, Malte, Strufe, Thorsten, Hamacher, Kay
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2017
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5450175/
https://ncbi.nlm.nih.gov/pubmed/28572834
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s13015-017-0105-0
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