aRNApipe: a balanced, efficient and distributed pipeline for processing RNA-seq data in high-performance computing environments

SUMMARY: The wide range of RNA-seq applications and their high-computational needs require the development of pipelines orchestrating the entire workflow and optimizing usage of available computational resources. We present aRNApipe, a project-oriented pipeline for processing of RNA-seq data in high...

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Veröffentlicht in:Bioinformatics
Hauptverfasser: Alonso, Arnald, Lasseigne, Brittany N, Williams, Kelly, Nielsen, Josh, Ramaker, Ryne C, Hardigan, Andrew A, Johnston, Bobbi, Roberts, Brian S, Cooper, Sara J, Marsal, Sara, Myers, Richard M
Format: Artigo
Sprache:Inglês
Veröffentlicht: Oxford University Press 2017
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Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC5447234/
https://ncbi.nlm.nih.gov/pubmed/28108448
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btx023
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