Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array with minfi

SUMMARY: The minfi package is widely used for analyzing Illumina DNA methylation array data. Here we describe modifications to the minfi package required to support the HumanMethylationEPIC (‘EPIC’) array from Illumina. We discuss methods for the joint analysis and normalization of data from the Hum...

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Bibliographic Details
Published in:Bioinformatics
Main Authors: Fortin, Jean-Philippe, Triche, Timothy J., Hansen, Kasper D
Format: Artigo
Language:Inglês
Published: Oxford University Press 2017
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Applications Notes
Online Access:https://ncbi.nlm.nih.gov/pmc/articles/PMC5408810/
https://ncbi.nlm.nih.gov/pubmed/28035024
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw691
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