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The combination of direct and paired link graphs can boost repetitive genome assembly

Currently, most paired link based scaffolding algorithms intrinsically mask the sequences between two linked contigs and bypass their direct link information embedded in the original de Bruijn assembly graph. Such disadvantage substantially complicates the scaffolding process and leads to the inabil...

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Detalhes bibliográficos
Publicado no:Nucleic Acids Res
Main Authors: Shi, Wenyu, Ji, Peifeng, Zhao, Fangqing
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2017
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5399794/
https://ncbi.nlm.nih.gov/pubmed/27924003
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkw1191
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