Identifying Transmission Clusters with Cluster Picker and HIV-TRACE

We compared the behavior of two approaches (Cluster Picker and HIV-TRACE) at varying genetic distances to identify transmission clusters. We used three HIV gp41 sequence datasets originating from the Rakai Community Cohort Study: (1) next-generation sequence (NGS) data from nine linked couples; (2)...

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Bibliografiske detaljer
Udgivet i:AIDS Res Hum Retroviruses
Main Authors: Rose, Rebecca, Lamers, Susanna L., Dollar, James J., Grabowski, Mary K., Hodcroft, Emma B., Ragonnet-Cronin, Manon, Wertheim, Joel O., Redd, Andrew D., German, Danielle, Laeyendecker, Oliver
Format: Artigo
Sprog:Inglês
Udgivet: Mary Ann Liebert, Inc. 2017
Fag:
Epidemiology
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC5333565/
https://ncbi.nlm.nih.gov/pubmed/27824249
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1089/aid.2016.0205
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