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Alignment-free [Formula: see text] oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences
Viruses and their host genomes often share similar oligonucleotide frequency (ONF) patterns, which can be used to predict the host of a given virus by finding the host with the greatest ONF similarity. We comprehensively compared 11 ONF metrics using several k-mer lengths for predicting host taxonom...
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| Опубликовано в: : | Nucleic Acids Res |
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| Главные авторы: | , , , , |
| Формат: | Artigo |
| Язык: | Inglês |
| Опубликовано: |
Oxford University Press
2017
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| Предметы: | |
| Online-ссылка: | https://ncbi.nlm.nih.gov/pmc/articles/PMC5224470/ https://ncbi.nlm.nih.gov/pubmed/27899557 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkw1002 |
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