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LTRclassifier: A website for fast structural LTR retrotransposons classification in plants

Automatic classification of LTR retrotransposons is a big challenge in the area of massive genomics. Many tools were developed to detect them but automatic classification is somehow challenging. Here we propose a simple approach, LTRclassifier, based on HMM recognition followed by BLAST analyses (i)...

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Podrobná bibliografie
Vydáno v:Mob Genet Elements
Hlavní autoři: Monat, Cecile, Tando, Ndomassi, Tranchant-Dubreuil, Christine, Sabot, Francois
Médium: Artigo
Jazyk:Inglês
Vydáno: Taylor & Francis 2016
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC5173273/
https://ncbi.nlm.nih.gov/pubmed/28090381
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1080/2159256X.2016.1241050
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