Removing duplicate reads using graphics processing units

BACKGROUND: During library construction polymerase chain reaction is used to enrich the DNA before sequencing. Typically, this process generates duplicate read sequences. Removal of these artifacts is mandatory, as they can affect the correct interpretation of data in several analyses. Ideally, dupl...

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Shranjeno v:
Bibliografske podrobnosti
izdano v:BMC Bioinformatics
Main Authors: Manconi, Andrea, Moscatelli, Marco, Armano, Giuliano, Gnocchi, Matteo, Orro, Alessandro, Milanesi, Luciano
Format: Artigo
Jezik:Inglês
Izdano: BioMed Central 2016
Teme:
Research
Online dostop:https://ncbi.nlm.nih.gov/pmc/articles/PMC5123249/
https://ncbi.nlm.nih.gov/pubmed/28185553
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-016-1192-5
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