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Exact calculation of loop formation probability identifies folding motifs in RNA secondary structures

RNA secondary structure prediction is widely used to analyze RNA sequences. In an RNA partition function calculation, free energy nearest neighbor parameters are used in a dynamic programming algorithm to estimate statistical properties of the secondary structure ensemble. Previously, partition func...

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Bibliografiska uppgifter
I publikationen:RNA
Huvudupphovsmän: Sloma, Michael F., Mathews, David H.
Materialtyp: Artigo
Språk:Inglês
Publicerad: Cold Spring Harbor Laboratory Press 2016
Ämnen:
Länkar:https://ncbi.nlm.nih.gov/pmc/articles/PMC5113201/
https://ncbi.nlm.nih.gov/pubmed/27852924
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1261/rna.053694.115
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