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rasbhari: Optimizing Spaced Seeds for Database Searching, Read Mapping and Alignment-Free Sequence Comparison

Many algorithms for sequence analysis rely on word matching or word statistics. Often, these approaches can be improved if binary patterns representing match and don’t-care positions are used as a filter, such that only those positions of words are considered that correspond to the match positions o...

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Publicat a:PLoS Comput Biol
Autors principals: Hahn, Lars, Leimeister, Chris-André, Ounit, Rachid, Lonardi, Stefano, Morgenstern, Burkhard
Format: Artigo
Idioma:Inglês
Publicat: Public Library of Science 2016
Matèries:
Accés en línia:https://ncbi.nlm.nih.gov/pmc/articles/PMC5070788/
https://ncbi.nlm.nih.gov/pubmed/27760124
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1371/journal.pcbi.1005107
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