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PEP_scaffolder: using (homologous) proteins to scaffold genomes

Motivation: Recovering the gene structures is one of the important goals of genome assembly. In low-quality assemblies, and even some high-quality assemblies, certain gene regions are still incomplete; thus, novel scaffolding approaches are required to complete gene regions. Results: We developed an...

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Vydáno v:Bioinformatics
Hlavní autoři: Zhu, Bai-Han, Song, Ying-Nan, Xue, Wei, Xu, Gui-Cai, Xiao, Jun, Sun, Ming-Yuan, Sun, Xiao-Wen, Li, Jiong-Tang
Médium: Artigo
Jazyk:Inglês
Vydáno: Oxford University Press 2016
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC5048069/
https://ncbi.nlm.nih.gov/pubmed/27334475
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btw378
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