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The exon quantification pipeline (EQP): a comprehensive approach to the quantification of gene, exon and junction expression from RNA-seq data

The quantification of transcriptomic features is the basis of the analysis of RNA-seq data. We present an integrated alignment workflow and a simple counting-based approach to derive estimates for gene, exon and exon–exon junction expression. In contrast to previous counting-based approaches, EQP ta...

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Detalhes bibliográficos
Publicado no:Nucleic Acids Res
Main Authors: Schuierer, Sven, Roma, Guglielmo
Formato: Artigo
Idioma:Inglês
Publicado em: Oxford University Press 2016
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC5027495/
https://ncbi.nlm.nih.gov/pubmed/27302131
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkw538
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