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ScaffoldScaffolder: solving contig orientation via bidirected to directed graph reduction
Motivation: The contig orientation problem, which we formally define as the MAX-DIR problem, has at times been addressed cursorily and at times using various heuristics. In setting forth a linear-time reduction from the MAX-CUT problem to the MAX-DIR problem, we prove the latter is NP-complete. We c...
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| izdano v: | Bioinformatics |
|---|---|
| Main Authors: | , , , , |
| Format: | Artigo |
| Jezik: | Inglês |
| Izdano: |
Oxford University Press
2016
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| Teme: | |
| Online dostop: | https://ncbi.nlm.nih.gov/pmc/articles/PMC5006237/ https://ncbi.nlm.nih.gov/pubmed/26382194 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btv548 |
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