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Fast comparison of genomic and meta-genomic reads with alignment-free measures based on quality values

BACKGROUND: Sequencing technologies are generating enormous amounts of read data, however assembly of genomes and metagenomes remain among the most challenging tasks. In this paper we study the comparison of genomes and metagenomes only based on read data, using word counts statistics called alignme...

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Pubblicato in:BMC Med Genomics
Autori principali: Comin, Matteo, Schimd, Michele
Natura: Artigo
Lingua:Inglês
Pubblicazione: BioMed Central 2016
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Accesso online:https://ncbi.nlm.nih.gov/pmc/articles/PMC4989896/
https://ncbi.nlm.nih.gov/pubmed/27535823
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12920-016-0193-6
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