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BetaSCPWeb: side-chain prediction for protein structures using Voronoi diagrams and geometry prioritization

Many applications, such as protein design, homology modeling, flexible docking, etc. require the prediction of a protein's optimal side-chain conformations from just its amino acid sequence and backbone structure. Side-chain prediction (SCP) is an NP-hard energy minimization problem. Here, we p...

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Bibliografiske detaljer
Udgivet i:Nucleic Acids Res
Main Authors: Ryu, Joonghyun, Lee, Mokwon, Cha, Jehyun, Laskowski, Roman A., Ryu, Seong Eon, Kim, Deok-Soo
Format: Artigo
Sprog:Inglês
Udgivet: Oxford University Press 2016
Fag:
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC4987919/
https://ncbi.nlm.nih.gov/pubmed/27151195
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/nar/gkw368
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