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BAMQL: a query language for extracting reads from BAM files
BACKGROUND: It is extremely common to need to select a subset of reads from a BAM file based on their specific properties. Typically, a user unpacks the BAM file to a text stream using SAMtools, parses and filters the lines using AWK, then repacks them using SAMtools. This process is tedious and err...
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| Publicado no: | BMC Bioinformatics |
|---|---|
| Main Authors: | , , , , , |
| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
BioMed Central
2016
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| Assuntos: | |
| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC4982315/ https://ncbi.nlm.nih.gov/pubmed/27516195 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-016-1162-y |
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