PIPITS: an automated pipeline for analyses of fungal internal transcribed spacer sequences from the Illumina sequencing platform

1. Studying fungal biodiversity using data generated from Illumina MiSeq sequencing platforms poses a number of bioinformatic challenges with the analysis typically involving a large number of tools for each analytical step from quality filtering to generating identified operational taxonomic unit (...

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Vydáno v:Methods Ecol Evol
Hlavní autoři: Gweon, Hyun S., Oliver, Anna, Taylor, Joanne, Booth, Tim, Gibbs, Melanie, Read, Daniel S., Griffiths, Robert I., Schonrogge, Karsten
Médium: Artigo
Jazyk:Inglês
Vydáno: John Wiley and Sons Inc. 2015
Témata:
Fungal Genetics
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC4981123/
https://ncbi.nlm.nih.gov/pubmed/27570615
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1111/2041-210X.12399
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