An integrative and applicable phylogenetic footprinting framework for cis-regulatory motifs identification in prokaryotic genomes

BACKGROUND: Phylogenetic footprinting is an important computational technique for identifying cis-regulatory motifs in orthologous regulatory regions from multiple genomes, as motifs tend to evolve slower than their surrounding non-functional sequences. Its application, however, has several difficul...

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Bibliografiske detaljer
Udgivet i:BMC Genomics
Main Authors: Liu, Bingqiang, Zhang, Hanyuan, Zhou, Chuan, Li, Guojun, Fennell, Anne, Wang, Guanghui, Kang, Yu, Liu, Qi, Ma, Qin
Format: Artigo
Sprog:Inglês
Udgivet: BioMed Central 2016
Fag:
Methodology Article
Online adgang:https://ncbi.nlm.nih.gov/pmc/articles/PMC4977642/
https://ncbi.nlm.nih.gov/pubmed/27507169
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12864-016-2982-x
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