Integrated analyses using RNA-Seq data reveal viral genomes, single nucleotide variations, the phylogenetic relationship, and recombination for Apple stem grooving virus

BACKGROUND: Next-generation sequencing (NGS) provides many possibilities for plant virology research. In this study, we performed integrated analyses using plant transcriptome data for plant virus identification using Apple stem grooving virus (ASGV) as an exemplar virus. We used 15 publicly availab...

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Detalhes bibliográficos
Publicado no:BMC Genomics
Main Authors: Jo, Yeonhwa, Choi, Hoseong, Kim, Sang-Min, Kim, Sun-Lim, Lee, Bong Choon, Cho, Won Kyong
Formato: Artigo
Idioma:Inglês
Publicado em: BioMed Central 2016
Assuntos:
Research Article
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC4977635/
https://ncbi.nlm.nih.gov/pubmed/27507588
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12864-016-2994-6
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